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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901390.1_cds_XP_016451398.1_45755
CDS Infomation

[gene=LOC107776091] [db_xref=GeneID:107776091] [protein=methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like] [protein_id=XP_016451398.1] [location=complement(join(163731..163934,164008..164064,164353..164484,164738..164812,165777..165941,166040..166272,166416..166506,166649..167083,170168..170287,170389..170586))] [gbkey=CDS]
Sequence

ATGCTGCGAATTTGGACAAGGAGATTAGCTTCAGAATGCTCCATTTCACGTCGGATATAC
CCGGCTAGTTTCATTTCGACCCGAAATAGCTCCATGGGAATCCTTCCCGACACTCTCGAC
CGTAGCTCCGAGTCGTATTCTCGCAACTCTAAAGTCATGGATGGACTTGTTTCCCAGCTT
CACTCTCACATTCGAAAGGTTATGGAAGGAGGAGGGGCAGAAGCAGTGAAGAGACATAGA
AGTAGGGATAAGCTTCTCCCTAGAGAGAGGATTGAACGGCTTATTGACCCTGGCTCTTCT
TTCCTTGAGCTTTCTCAGCTTGCGGGTCATGAATTGTACCAAGAATCATTACCTTCTGGT
GGGATAGTTATTGGAATTGGAACAATACACGGGAGACTGTGTATGTTGGTGGCAAATGAT
CCTACTGTCAAAGGTGGAAGTTACTTTCCAATAACTGTCAAGAAACATCTCAGGGCACAA
GAGATTGCTGCTCAATGCAAACTACCGTGTATATATCTTGTTGATAGTGGTGGAGCTTTC
CTTCCAAAGCAAGCCGAGGTTTTTCCGGACAAAGAAAATTTTGGGAGAGTATTTTATAAT
CAAGCTGTGATGTCTTCAGAAGGTATTCCTCAAATCGCACTGGTGCTAGGTTCTTGTACT
GCTGGAGGAGCTTACATTCCTGCAATGGCTGATGAGAGTGTAATGGTCAAAGGGAATGGT
ACAATATTTTTGGCTGGACCTCCTCTTGTAAAGGCAGCAACTGGTGAGGAAGTTTCTGCA
GAAGACCTTGGAGGTGCAACTGTGCATTGTAAGACATCAGGGGTTTCAGACTACTTTGCC
CATGATGAACTGCATGCGCTTGCTATAGGAAGGAATATTGTTAAGAACTTGCACATGGCT
GGTGGTCCAGAAGCATCTGGACAAACTAGAGCTGATTATAAAGAACCTTTATATGATGTG
AAAGAACTTCGCACCATTGCACCAACAGACCTCAAACAGCCCTTTGATGTTAGATCAGTT
ATTGCTCGCATTGTTGATGGAAGTGAATTTGATGAATTCAAGAAACTGTATGGCACTACA
CTTGTGACTGGCTTTGGAAGAATTTGTGGACAGCCAGTAGGGATCCTTGGAAACAATGGG
ATACTGTTTAATGAATCTGCTCAGAAAGGGGCACACTTTATTGAATTATGTACTCAACGT
AACATTCCTCTGATCTTTCTTCAGAATATTACTGGATTTATGGTTGGGTCCAAATCAGAG
GCAAGTGGTATTGCCAAAGCTGGAGCTAAAATGGTGATGGCAGTCTCTTGTGCGAAGGTT
CCCAAGATCACGGTAGTTATCGGTGGAAGCTTTGGAGCTGGCAACTATGCAATGTGTGGA
CGTGCATATAGTCCCAATTTCATGTTCTTCTGGCCAAATGCTCGAATATCTGTAATGGGA
GGTCCACAGGCTGCTGGAGTCCTTGCTCAAGTAGAAAAAGCCACCAAGAAAAAGAAGGGA
ATTCAGTGGGCAAAGGAAGAGGAAGAAAAGTTCAAGGCTGAAGTTGTAGAGGCGTATGAC
AGAGAGGGCAGCCCATATTATGCCACAGCAAGGCTTTGGGATGATGGCATAATCGATCCA
GCAGACACGAGAAAAATATTGAGCCTGTGCATCTCTGCTTCCTTGAATCGTGGACCAGAA
GCTACGAAATTTGGTGTCTTCAGAATGTGA

Peptide Sequence

PEP ID

XP_016451398.1
PEP Infomation

PREDICTED: methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like [Nicotiana tabacum]
Sequence

MLRIWTRRLASECSISRRIYPASFISTRNSSMGILPDTLDRSSESYSRNSKVMDGLVSQL
HSHIRKVMEGGGAEAVKRHRSRDKLLPRERIERLIDPGSSFLELSQLAGHELYQESLPSG
GIVIGIGTIHGRLCMLVANDPTVKGGSYFPITVKKHLRAQEIAAQCKLPCIYLVDSGGAF
LPKQAEVFPDKENFGRVFYNQAVMSSEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNG
TIFLAGPPLVKAATGEEVSAEDLGGATVHCKTSGVSDYFAHDELHALAIGRNIVKNLHMA
GGPEASGQTRADYKEPLYDVKELRTIAPTDLKQPFDVRSVIARIVDGSEFDEFKKLYGTT
LVTGFGRICGQPVGILGNNGILFNESAQKGAHFIELCTQRNIPLIFLQNITGFMVGSKSE
ASGIAKAGAKMVMAVSCAKVPKITVVIGGSFGAGNYAMCGRAYSPNFMFFWPNARISVMG
GPQAAGVLAQVEKATKKKKGIQWAKEEEEKFKAEVVEAYDREGSPYYATARLWDDGIIDP
ADTRKILSLCISASLNRGPEATKFGVFRM

Transcript Sequence

Gene sequence data has not been registered.